Package: DarkDiv 0.3.0
DarkDiv: Estimating Dark Diversity and Site-Specific Species Pools
Estimation of dark diversity and site-specific species pools using species co-occurrences. It includes implementations of probabilistic dark diversity based on the Hypergeometric distribution, as well as estimations based on the Beals index, which can be transformed to binary predictions using different thresholds, or transformed into a favorability index. All methods include the possibility of using a calibration dataset that is used to estimate the indication matrix between pairs of species, or to estimate dark diversity directly on a single dataset. See De Caceres and Legendre (2008) <doi:10.1007/s00442-008-1017-y>, Lewis et al. (2016) <doi:10.1111/2041-210X.12443>, Partel et al. (2011) <doi:10.1016/j.tree.2010.12.004>, Real et al. (2017) <doi:10.1093/sysbio/syw072> for further information.
Authors:
DarkDiv_0.3.0.tar.gz
DarkDiv_0.3.0.zip(r-4.5)DarkDiv_0.3.0.zip(r-4.4)DarkDiv_0.3.0.zip(r-4.3)
DarkDiv_0.3.0.tgz(r-4.4-any)DarkDiv_0.3.0.tgz(r-4.3-any)
DarkDiv_0.3.0.tar.gz(r-4.5-noble)DarkDiv_0.3.0.tar.gz(r-4.4-noble)
DarkDiv_0.3.0.tgz(r-4.4-emscripten)DarkDiv_0.3.0.tgz(r-4.3-emscripten)
DarkDiv.pdf |DarkDiv.html✨
DarkDiv/json (API)
# Install 'DarkDiv' in R: |
install.packages('DarkDiv', repos = c('https://carlosp-carmona.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 4 years agofrom:acb4348639. Checks:OK: 7. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Oct 25 2024 |
R-4.5-win | OK | Oct 25 2024 |
R-4.5-linux | OK | Oct 25 2024 |
R-4.4-win | OK | Oct 25 2024 |
R-4.4-mac | OK | Oct 25 2024 |
R-4.3-win | OK | Oct 25 2024 |
R-4.3-mac | OK | Oct 25 2024 |
Exports:DarkDiv
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Dark Diversity | DarkDiv |